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Series GSE256547 Query DataSets for GSE256547
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR002FCO)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of transgenic worms expressing CEH-36-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR002FCO/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL22765 Illumina HiSeq 4000 (Caenorhabditis elegans)
Samples (2)
GSM8106129 TF ChIP-seq from whole organism (ENCLB824ADD)
GSM8106130 TF ChIP-seq from whole organism (ENCLB935ENA)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256547_ENCFF022BIF_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256547_ENCFF030VOL_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256547_ENCFF048NQD_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256547_ENCFF200GKD_read-depth_normalized_signal_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE256547_ENCFF243NUY_optimal_IDR_thresholded_peaks_ce10.bigBed 104.9 Kb (ftp)(http) BIGBED
GSE256547_ENCFF252ZQU_peaks_and_background_as_input_for_IDR_ce10.bed.gz 765.5 Kb (ftp)(http) BED
GSE256547_ENCFF416PID_read-depth_normalized_signal_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE256547_ENCFF524NXN_optimal_IDR_thresholded_peaks_ce11.bigBed 104.1 Kb (ftp)(http) BIGBED
GSE256547_ENCFF581DHL_peaks_and_background_as_input_for_IDR_ce11.bed.gz 765.3 Kb (ftp)(http) BED
GSE256547_ENCFF695RFQ_optimal_IDR_thresholded_peaks_ce10.bed.gz 37.5 Kb (ftp)(http) BED
GSE256547_ENCFF700VHG_optimal_IDR_thresholded_peaks_ce11.bed.gz 36.7 Kb (ftp)(http) BED
GSE256547_ENCFF740HYA_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256547_ENCFF888DDU_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256547_ENCFF992CHB_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256547_RAW.tar 123.4 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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