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Series GSE256560 Query DataSets for GSE256560
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR005SGO)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-ces-1 in L4 larva worms.

For data usage terms and conditions, please refer to and
Overall design
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (4)
GSM8106151 TF ChIP-seq from whole organism (ENCLB670APQ)
GSM8106152 TF ChIP-seq from whole organism (ENCLB317NQT)
GSM8106153 TF ChIP-seq from whole organism (ENCLB304ECS)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256560_ENCFF086YJZ_peaks_and_background_as_input_for_IDR_ce10.bed.gz 646.7 Kb (ftp)(http) BED
GSE256560_ENCFF113ZGF_optimal_IDR_thresholded_peaks_ce10.bed.gz 21.9 Kb (ftp)(http) BED
GSE256560_ENCFF118BEY_peaks_and_background_as_input_for_IDR_ce11.bed.gz 645.1 Kb (ftp)(http) BED
GSE256560_ENCFF119UXI_optimal_IDR_thresholded_peaks_ce10.bigBed 69.9 Kb (ftp)(http) BIGBED
GSE256560_ENCFF208MBT_optimal_IDR_thresholded_peaks_ce11.bigBed 69.3 Kb (ftp)(http) BIGBED
GSE256560_ENCFF243KEV_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.1 Mb (ftp)(http) BIGBED
GSE256560_ENCFF373KPG_optimal_IDR_thresholded_peaks_ce11.bed.gz 21.3 Kb (ftp)(http) BED
GSE256560_ENCFF416GZO_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.1 Mb (ftp)(http) BIGBED
GSE256560_ENCFF557NMP_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256560_ENCFF569ELZ_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256560_ENCFF657ZYM_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256560_ENCFF677HKY_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256560_ENCFF748HGM_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256560_ENCFF797QRH_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256560_RAW.tar 248.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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