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Series GSE256577

Query DataSets for GSE256577

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR189IPH)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing onecut-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR189IPH/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (2)

GSM8106179	TF ChIP-seq from whole organism (ENCLB757CHN)
GSM8106180	TF ChIP-seq from whole organism (ENCLB934LFR)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256577_ENCFF202CYP_conservative_IDR_thresholded_peaks_dm6.bigBed	235.8 Kb	(ftp)(http)	BIGBED
GSE256577_ENCFF271MAK_IDR_thresholded_peaks_dm6.bed.gz	124.3 Kb	(ftp)(http)	BED
GSE256577_ENCFF707QHO_fold_change_over_control_dm6.bigWig	307.0 Mb	(ftp)(http)	BIGWIG
GSE256577_ENCFF765CWR_IDR_thresholded_peaks_dm6.bigBed	245.9 Kb	(ftp)(http)	BIGBED
GSE256577_ENCFF908HMA_IDR_ranked_peaks_dm6.bed.gz	1.5 Mb	(ftp)(http)	BED
GSE256577_ENCFF976GKE_IDR_ranked_peaks_dm6.bed.gz	1.5 Mb	(ftp)(http)	BED
GSE256577_ENCFF977QYY_conservative_IDR_thresholded_peaks_dm6.bed.gz	116.6 Kb	(ftp)(http)	BED
GSE256577_ENCFF983ZBM_signal_p-value_dm6.bigWig	247.7 Mb	(ftp)(http)	BIGWIG
GSE256577_RAW.tar	933.0 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA