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Series GSE257470 Query DataSets for GSE257470
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR266NAT)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of transgenic worms expressing ELT-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR266NAT/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 25, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (2)
GSM8107743 TF ChIP-seq from whole organism (ENCLB230BMB)
GSM8107744 TF ChIP-seq from whole organism (ENCLB096ZHX)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257470_ENCFF025ASW_control_normalized_signal_ce10.bigWig 9.9 Mb (ftp)(http) BIGWIG
GSE257470_ENCFF169AVY_signal_of_unique_reads_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257470_ENCFF188GID_optimal_IDR_thresholded_peaks_ce11.bigBed 218.6 Kb (ftp)(http) BIGBED
GSE257470_ENCFF238QAW_optimal_IDR_thresholded_peaks_ce10.bed.gz 92.0 Kb (ftp)(http) BED
GSE257470_ENCFF333BEK_peaks_and_background_as_input_for_IDR_ce11.bed.gz 763.2 Kb (ftp)(http) BED
GSE257470_ENCFF366BQY_optimal_IDR_thresholded_peaks_ce11.bed.gz 95.1 Kb (ftp)(http) BED
GSE257470_ENCFF514UXE_control_normalized_signal_ce11.bigWig 9.9 Mb (ftp)(http) BIGWIG
GSE257470_ENCFF553EUL_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257470_ENCFF650ZVJ_read-depth_normalized_signal_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257470_ENCFF663PIS_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257470_ENCFF671IPE_peaks_and_background_as_input_for_IDR_ce10.bed.gz 760.8 Kb (ftp)(http) BED
GSE257470_ENCFF697BJS_optimal_IDR_thresholded_peaks_ce10.bigBed 218.4 Kb (ftp)(http) BIGBED
GSE257470_ENCFF902QML_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257470_ENCFF910FNI_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257470_RAW.tar 123.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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