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Series GSE257771 Query DataSets for GSE257771
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR565YWG)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of transgenic worms expressing K02D7.2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR565YWG/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 25, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL22765 Illumina HiSeq 4000 (Caenorhabditis elegans)
Samples (2)
GSM8108506 TF ChIP-seq from whole organism (ENCLB902IJY)
GSM8108507 TF ChIP-seq from whole organism (ENCLB923RLV)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257771_ENCFF047QCP_read-depth_normalized_signal_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF074XUA_read-depth_normalized_signal_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF078AXY_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF114RWR_signal_of_unique_reads_ce10.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF155VRT_optimal_IDR_thresholded_peaks_ce11.bigBed 67.1 Kb (ftp)(http) BIGBED
GSE257771_ENCFF160HTQ_signal_of_unique_reads_ce11.bigWig 9.5 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF184WRP_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257771_ENCFF298ETU_peaks_and_background_as_input_for_IDR_ce11.bed.gz 771.7 Kb (ftp)(http) BED
GSE257771_ENCFF316ZZQ_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257771_ENCFF568JUK_optimal_IDR_thresholded_peaks_ce10.bed.gz 12.3 Kb (ftp)(http) BED
GSE257771_ENCFF570XYU_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257771_ENCFF749ODM_peaks_and_background_as_input_for_IDR_ce10.bed.gz 771.8 Kb (ftp)(http) BED
GSE257771_ENCFF848FCV_optimal_IDR_thresholded_peaks_ce10.bigBed 66.8 Kb (ftp)(http) BIGBED
GSE257771_ENCFF956GSL_optimal_IDR_thresholded_peaks_ce11.bed.gz 12.5 Kb (ftp)(http) BED
GSE257771_RAW.tar 123.5 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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