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Series GSE25860 Query DataSets for GSE25860
Status Public on Jul 01, 2011
Title High-frequency stimulation of the ventrolateral thalamus regulates gene expression in hippocampus, motor cortex and caudate-putamen
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Transcriptional profiling of rat hippocampus comparing rats subjected to chronic (1 hour daily during 14 days) vetrolateral thalamus stimulation (DBS group) with sham operated rats (with electrode placement but without stimulation) and with naive rats.
 
Overall design Three-condition experiment, DBS, sham and naive. Every sample consisted of pooled hippocampi from three rats. Slices between Bregma levels -2 and -4 were used for dissections of the hippocampi. Common reference design, comparing every condition versus a brain pooled tissue consisting of pooled hippocampal, thalamic and cortical brain tissue of the naive (n=4), sham-operated (n=5) and stimulated (n=4) rats. Biological replicates: 4 DBS, 4 sham and 3 naive. One replicate per array.
Deep brain stimulation
 
Contributor(s) Huguet G, Kádár E
Citation(s) 21458429
Submission date Dec 06, 2010
Last update date Mar 22, 2012
Contact name Gemma Huguet
E-mail(s) gemma.huguet@udg.edu
Organization name Universitat de Girona
Street address Campus de Montilivi
City Girona
ZIP/Postal code 17071
Country Spain
 
Platforms (1)
GPL11280 Agilent-024196 Whole Rat Genome Microarray 4x44K (Feature Number version)
Samples (11)
GSM634960 Hippocampi DBS replicate 1
GSM634961 Hippocampi DBS replicate 2
GSM634962 Hippocampi DBS replicate 3
Relations
BioProject PRJNA135783

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25860_RAW.tar 66.8 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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