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Series GSE259201

Query DataSets for GSE259201

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR532BHA)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

Input control for ChIP-seq on transgenic flies expressing CrebB-eGFP fusion proteins.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR532BHA/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 26, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21306

Illumina HiSeq 4000 (Drosophila melanogaster)

Samples (3)

GSM8111279	TF ChIP-seq from whole organism (ENCLB641NQP)
GSM8111280	TF ChIP-seq from whole organism (ENCLB923AEA)
GSM8111281	TF ChIP-seq from whole organism (ENCLB307RIP)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE259201_ENCFF056KVS_read-depth_normalized_signal_dm6.bigWig	17.0 Mb	(ftp)(http)	BIGWIG
GSE259201_ENCFF090JJN_optimal_IDR_thresholded_peaks_dm6.bed.gz	81.7 Kb	(ftp)(http)	BED
GSE259201_ENCFF318AWY_signal_of_unique_reads_dm6.bigWig	17.0 Mb	(ftp)(http)	BIGWIG
GSE259201_ENCFF564HWM_peaks_and_background_as_input_for_IDR_dm6.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE259201_ENCFF655EMQ_control_normalized_signal_dm6.bigWig	13.2 Mb	(ftp)(http)	BIGWIG
GSE259201_ENCFF900ZMT_optimal_IDR_thresholded_peaks_dm6.bigBed	175.6 Kb	(ftp)(http)	BIGBED
GSE259201_ENCFF966WYK_peaks_and_background_as_input_for_IDR_dm6.bed.gz	763.0 Kb	(ftp)(http)	BED
GSE259201_RAW.tar	145.7 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA