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Series GSE259313 Query DataSets for GSE259313
Status Public on Feb 27, 2024
Title Sex differences in the expression and function of hepatic very low-density lipoprotein receptor during protein deficiency in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Very low-density lipoprotein (VLDL) receptor (VLDLR), a member of the low-density lipoprotein receptor family, is responsible for VLDL uptake in peripheral tissues. We reported that significant increase in hepatic VLDLR levels following protein restriction in male mice does not contribute to hepatic fat accumulation, indicating that VLDLR may have hitherto unknown functions. Here, we used RNA-sequencing analysis of liver samples to analysis the effects of protein restriction on hepatic VLDLR in male and female mice.
 
Overall design Wild-type (WT) and Vldlr knockout (KO) mice were fed a control or low-protein diet containing 20% or 2% protein, respectively, for 20 days. Total RNA was extracted from frozen liver samples and quantified using spectrophotometry. RNA library preparation and RNA sequencing were performed by Novogene Co., LTD.
 
Contributor(s) Cao J, Takenaka A
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Submission date Feb 26, 2024
Last update date Feb 27, 2024
Contact name Jiuxiang Cao
E-mail(s) wlwjcjx@gmail.com
Organization name Meiji University
Department School of Agriculture
Lab Food biochemistry
Street address 1 Chome-1-1 Higashimita
City Tama Ward
State/province Kanagawa
ZIP/Postal code 214-8571
Country Japan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM8113911 WT 20C Male
GSM8113912 WT 20C Female
GSM8113913 WT 2C Male
Relations
BioProject PRJNA1080630

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE259313_gene_count.xls.gz 2.1 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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