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Series GSE26043 Query DataSets for GSE26043
Status Public on Dec 14, 2010
Title Transcriptome analysis of Bacillus cereus B3711 during silver ion stress condition
Organism Bacillus cereus
Experiment type Expression profiling by array
Summary We have employed a whole genome microarray for gene expression profilling to understand the global view of the cellular mechanism and metabolic response of B. cereus B3711 exposed to 1 mM silver nitrate. RNA was extracted from B. cereus grown under silver treated and untreated set of conditions in duplicates at two different time points (30 & 60 min). Comparing the transcript profile of the control and treated cells, several differentially expressed genes were identified. These includes genes involved in various metabolic pathways, such as arginine and alanine metabolism, membrane transport system and alternate respiratory proteins such as arsenate reductase, stress related proteins, proteins of transcriptional regulators, hypothetical proteins and protein of two-component systems.
 
Overall design Agilent one-color experiment,Organism: Bacillus cereus ,Agilent-023971 Genotypic designed Custom Bacillus cereus 8x15k , Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442)
 
Contributor(s) Ganesh Babu MM, Gunasekaran P
Citation(s) 22071005
Submission date Dec 14, 2010
Last update date Sep 19, 2012
Contact name Genotypic technology
E-mail(s) sudha.rao@genotypic.co.in
Organization name Genotypic Technology
Street address 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
City Bangalore
State/province Karnataka
ZIP/Postal code 560094
Country India
 
Platforms (1)
GPL11312 Agilent-023971 Genotypic designed Custom Bacillus cereus 8x15k gene expression microarray
Samples (8)
GSM639520 No_silver_ion__1a_1/2h
GSM639521 No_silver_ion__2a_1h
GSM639522 No_silver_ion__1b_1/2h
Relations
BioProject PRJNA135537

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26043_RAW.tar 20.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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