|
| Status |
Public on May 29, 2024 |
| Title |
An activity regulated transcriptional program directly drives synaptogenesis |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
39103556 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R37 NS048392 |
Mechanisms of synaptic specificity in C. elegans |
STANFORD UNIVERSITY |
Kang Shen |
|
| |
| Submission date |
Feb 29, 2024 |
| Last update date |
Aug 07, 2024 |
| Contact name |
Callista Yee |
| E-mail(s) |
calyee@stanford.edu
|
| Organization name |
Stanford University/HHMI
|
| Street address |
327 Campus Drive, Shen lab, Bass Biology 329
|
| City |
Stanford |
| State/province |
California |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL13657 |
Illumina HiSeq 2000 (Caenorhabditis elegans) |
| GPL26522 |
MinION (Caenorhabditis elegans) |
|
| Samples (15)
|
| GSM7102586 |
L3 animals with dat-1_NanoDam control, replicate 1 |
| GSM7102587 |
L3 animals with dat-1_NanoDam control, replicate 2 |
| GSM7102588 |
L3 animals with dat-1_NanoDam control, replicate 3 |
| GSM7102589 |
L3 animals with dat-1 NanoDam and EGL-43::GFP, replicate 1 |
| GSM7102590 |
L3 animals with dat-1 NanoDam and EGL-43::GFP, replicate 2 |
| GSM7102591 |
L3 animals with dat-1 NanoDam and EGL-43::GFP, replicate 3 |
| GSM7102592 |
L3 animals with dat-1 NanoDam and FOS-1::GFP, replicate 1 |
| GSM7102593 |
L3 animals with dat-1 NanoDam and FOS-1::GFP, replicate 2 |
| GSM7102594 |
L3 animals with dat-1 NanoDam and FOS-1::GFP, replicate 3 |
| GSM8121367 |
Mixed stage neuronal nuclei, replicate 1 |
| GSM8121368 |
Mixed stage neuronal nuclei, replicate 2 |
| GSM8121369 |
Mixed stage neuronal nuclei, replicate 3 |
| GSM8121370 |
Mixed stage total nuclei, replicate 1 |
| GSM8121371 |
Mixed stage total nuclei, replicate 2 |
| GSM8121372 |
Mixed stage total nuclei, replicate 3 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE227552 |
NanoDam Profiling of EGL-43 and FOS-1 in Dopaminergic Neurons |
| GSE260636 |
ATAC-seq Profiling of Mixed Stage C. elegans Neuronal Nuclei |
|
| Relations |
| BioProject |
PRJNA1082381 |
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