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Series GSE260741 Query DataSets for GSE260741
Status Public on Mar 06, 2024
Title Artesunate inhibits the cell viability of diffuse large B cell lymphoma cells by increasing the susceptibility to ferroptosis (RNA-seq).
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Comparing the effects of artesunate versus DMSO in three DLBCL cell lines, we found a decrease in cell viability to 80%-60%. Over increasing artesunate dosage,we found increasing ROS generation and lipid peroxidation. In combination with the Ferrostatin-1 rescue experiment, we conclude that cell death induced by artesunate is ferroptotic. We compared the transcriptome of the U2932 cell line with and without 100µm artesunate in triplicate. A ferroptosis gene signature is shown to be enriched among the upregulated genes of this comparison. GPX4 protein expression was shown to be downregulated after artesunate in U2932 cells, but not in the rescue experiment with Ferrostatin-1. MT1G gene expression was identified as required for artesunate-mediated ferroptosis via targeted suppression by shRNAs. We present significantly decreased cell viability when combining artesunate with doxorubicin, suggesting a potential translation into clinic for treatment of ABC and GCB DLBCL.
 
Overall design To investigate the genes regulated by artesunate-induced cell death phenotype in diffuse large B-cell lymphoma(DLBCL),we extracted total RNA from U2932 cells treated with or without 100 μM artesunate and performed transcript sequencing.
 
Contributor(s) Geng C, Liu X, Zeng L, Zhang L
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BioProject PRJNA796695
Submission date Mar 03, 2024
Last update date Mar 14, 2024
Contact name Chengjie Geng
E-mail(s) gcj159357@gmail.com
Phone 16624742774
Organization name Jinan University
Department Life and Science Department
Lab Langxia Liu's Laboratary
Street address 广东省广州市天河区黄埔道西601
City Guangzhou
State/province 广东
ZIP/Postal code 510632
Country China
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (6)
GSM8123336 U-A-1
GSM8123337 U-A-2
GSM8123338 U-A-3

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE260741_All_gene_counts.list.txt.gz 312.4 Kb (ftp)(http) TXT
GSE260741_All_gene_fpkm.list.txt.gz 606.7 Kb (ftp)(http) TXT
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