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Series GSE26221 Query DataSets for GSE26221
Status Public on Mar 30, 2011
Title R13_1-6_eve-GFP
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary modENCODE_submission_2603
This submission comes from a modENCODE project of Kevin White. For full list of modENCODE projects, see
Project Goal: The White Lab is aiming to map the association of all the Transcription Factors (TF) and DNA associated proteins on the genome of Drosophila melanogaster. The main technique that will be used for this purpose is chromatin immunoprecipitation-on-chip (ChIP-on-chip) utilizing whole-genome tiling arrays. The data generated by ChIP-chip experiments consist basically of a plot of signal intensity across the genome. The highest signals correspond to positions in the genome occupied by the tested TF.
For data usage terms and conditions, please refer to and
Overall design EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: R13-YFP; Developmental Stage: Embryo 1-6h; Genotype: eveR13; [BACRO1LO1 eve YFP]attP2; Transgene: PhiC31; NUMBER OF REPLICATES: 2; EXPERIMENTAL FACTORS: Developmental Stage Embryo 1-6h; Antibody odg-GFP (target is eGFP); Strain R13-YFP
Web link
Contributor(s) White K, Negre N, Bild N
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA63463
Submission date Dec 21, 2010
Last update date Aug 19, 2013
Contact name DCC modENCODE
Phone 416-673-8579
Organization name Ontario Institute for Cancer Research
Street address MaRS Centre, South Tower, 101 College Street, Suite 800
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A3
Country Canada
Platforms (1)
GPL11301 Agilent-021781 1X1M Drosophila Tiling Array
Samples (2)
GSM699275 R13_1-6-GFP_1_1 extraction1_array1
GSM699276 R13_1-6-GFP_2_1 extraction2_array1

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26221_Agilent_labeling_protocol.pdf.gz 76.3 Kb (ftp)(http) PDF
GSE26221_R13_1-6-GFP_BC_DCC_merged.bed.gff.gz 20.9 Kb (ftp)(http) GFF
GSE26221_R13_1-6-GFP_BC_DCC_merged.wig.gz 10.7 Mb (ftp)(http) WIG
GSE26221_RAW.tar 550.8 Mb (http)(custom) TAR (of TXT)
Processed data are available on Series record

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