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Series GSE262358 Query DataSets for GSE262358
Status Public on Jun 01, 2024
Title The transcriptomic landscape of multiple organs in CHIKV-infected Rhesus monkeys and mice
Organisms Macaca mulatta; Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary Chikungunya virus (CHIKV) is a mosquito-borne alphavirus that has emerged as a significant public health concern due to its ability to cause severe arthralgia and occasionally fatal cases. The virus has been shown to infect a wide range of tissues, including the heart, liver, spleen, lungs, kidneys, and brain, leading to a spectrum of clinical manifestations.This study aims to investigate the impact of CHIKV infection on the transcriptome of various organs in rhesus monkeys and mice, providing insights into the molecular mechanisms underlying the pathogenesis of CHIKV in different host species.The transcriptome analysis revealed significant alterations in gene expression across the infected tissues in both species.
 
Overall design Following experimental infection with CHIKV, tissues from the heart, liver, spleen, lungs, kidneys, and brain were harvested from both rhesus monkeys and mice. Transcriptome sequencing was performed to analyze the global gene expression changes in response to the viral infection.
 
Contributor(s) Lin D, Tang C
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Submission date Mar 25, 2024
Last update date Jun 01, 2024
Contact name Lin dongdong
E-mail(s) Dongdong0216@student.pumc.edu.cn
Phone 18256786026
Organization name Peking Union Medical College
Street address 云南省昆明市五华区茭菱路
City 昆明市
State/province 云南
ZIP/Postal code 650032
Country China
 
Platforms (2)
GPL28330 DNBSEQ-T7 (Mus musculus)
GPL33913 DNBSEQ-T7 (Macaca mulatta)
Samples (72)
GSM8163793 Mon_BraC_R1
GSM8163794 Mon_BraC_R2
GSM8163795 Mon_BraC_R3
Relations
BioProject PRJNA1091580

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262358_monkey_All_reads_counts.xls.gz 5.0 Mb (ftp)(http) XLS
GSE262358_monkey_All_samples_TPM.xls.gz 12.9 Mb (ftp)(http) XLS
GSE262358_mouse_All_reads_counts.xls.gz 5.3 Mb (ftp)(http) XLS
GSE262358_mouse_All_samples_TPM.xls.gz 13.3 Mb (ftp)(http) XLS
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