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| Status |
Public on Apr 01, 2024 |
| Title |
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38648478 |
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| Submission date |
Mar 27, 2024 |
| Last update date |
May 24, 2024 |
| Contact name |
David Michael Suter |
| Organization name |
École polytechnique fédérale de Lausanne
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| Department |
Institute of Bioengineering
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| Lab |
UPSUTER
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| Street address |
EPFL SV-IN Station 19
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| City |
Lausanne |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
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| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (15)
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| GSM8172219 |
3T3_CDX2, CTCF, noDox, rep2 |
| GSM8172220 |
3T3_CDX2, CTCF, Dox, rep2 |
| GSM8172221 |
3T3_CDX2, HiC, noDox, rep1 |
| GSM8172222 |
3T3_CDX2, HiC, noDox, rep2 |
| GSM8172223 |
3T3_CDX2, HiC, Dox6h, rep1 |
| GSM8172224 |
3T3_CDX2, HiC, Dox6h, rep2 |
| GSM8172225 |
3T3_CDX2, HiC, Dox24h, rep1 |
| GSM8172226 |
3T3_CDX2, HiC, Dox24h, rep2 |
| GSM8172227 |
3T3_CDX2, RNA, noDox, rep1 |
| GSM8172228 |
3T3_CDX2, RNA, Dox, rep1 |
| GSM8172229 |
3T3_CDX2, RNA, noDox, rep2 |
| GSM8172230 |
3T3_CDX2, RNA, Dox, rep2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE262601 |
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure [ChIP-Seq] |
| GSE262602 |
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure [Hi-C] |
| GSE262603 |
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure [RNA-Seq] |
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| Relations |
| BioProject |
PRJNA1092625 |
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