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Series GSE262794 Query DataSets for GSE262794
Status Public on Jun 25, 2024
Title The Rubicon-WIPI axis regulates exosome biogenesis during aging
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Cells release intraluminal vesicles (ILVs) in multivesicular bodies as exosomes to communicate with other cells. Although recent studies suggest an intimate link between exosome biogenesis and autophagy, the detailed mechanism is not fully understood. Here we employed comprehensive RNAi screening for autophagy-related factors and discovered that Rubicon, a negative regulator of autophagy, is essential for exosome release. Rubicon recruits WIPI2d to endosomes to promote exosome biogenesis. Interactome analysis of WIPI2d identified the ESCRT components that are required for ILV formation. Notably, we found that Rubicon is required for an age-dependent increase of exosome release in mice. In addition, small RNA sequencing of serum exosomes revealed that Rubicon determines the fate of exosomal microRNAs associated with aging and longevity pathways. Taken together, our current results suggest that the Rubicon-WIPI axis functions as a key regulator of exosome biogenesis and is responsible for the age-dependent changes in exosome quantity and quality.
 
Overall design Exosomes isolated from young and aged mice with or without Rubicon knockout
 
Contributor(s) Yanagawa K, Yoshimori T, Edahiro R
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Submission date Mar 29, 2024
Last update date Jun 25, 2024
Contact name Ryuya Edahiro
E-mail(s) ryuya.edahiro@gmail.com
Organization name Osaka University
Street address Yamadaoka2-2
City Suita
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (12)
GSM8179460 C1
GSM8179461 C2
GSM8179462 C3
Relations
BioProject PRJNA1093398

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262794_gene_raw_count.xls.gz 2.1 Kb (ftp)(http) XLS
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Raw data are available in SRA

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