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Series GSE263835 Query DataSets for GSE263835
Status Public on Jun 06, 2024
Title Act1 modulates mRNA metabolism upon IL-17 stimulation
Organism Mus musculus
Experiment type Other
Summary The IL-17 receptor adaptor molecule Act1, an RNA binding protein, plays a critical role in IL-17-mediated cancer progression. Here we report a novel mechanism for how IL-17/Act1 induces chemoresistance by modulating redox homeostasis through epitranscriptomic regulation of antioxidant RNA metabolism. Transcriptome-wide mapping of direct Act1-RNA interactions revealed that Act1 binds to the 5'UTR of antioxidant mRNAs and Wilms' tumor 1-associating protein (WTAP), a key regulator in m6A methyltransferase complex. Strikingly, Act1's binding sites are located in proximity to m6A modification sites, which allows Act1 to promote the recruitment of elF3G for cap-independent translation. Loss of Act1’s RNA binding activity or Wtap knockdown abolished IL-17-induced m6A modification and translation of Wtap and antioxidant mRNAs, indicating a feedforward mechanism of Act1-WTAP loop. We then developed antisense oligonucleotides (Wtap ASO) that specifically disrupts Act1’s binding to Wtap mRNA, abolishing IL-17/Act1-WTAP-mediated antioxidant protein production during chemotherapy. Wtap ASO substantially increased the antitumor efficacy of cisplatin, demonstrating a potential therapeutic strategy for chemoresistance.
 
Overall design Cross-Linking and Immunoprecipitation in combination with next-generation sequencing (CLIP-seq) was performed to identify Act1-binding sites at high resolution in a transcriptome-wide manner.
 
Contributor(s) Hong L
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Submission date Apr 12, 2024
Last update date Jun 07, 2024
Contact name Lingzi Hong
E-mail(s) lxh291@case.edu
Organization name Case western reserve university
Department biochemistry
Street address 10900 Euclid Avenue
City cleveland
State/province oh
ZIP/Postal code 44106
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (3)
GSM8199890 Act1_CLIP1
GSM8199891 Act1_CLIP2
GSM8199892 Act1_CLIP3
Relations
BioProject PRJNA1099569

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE263835_Act1utrclustert.csv.gz 362.2 Kb (ftp)(http) CSV
GSE263835_RAW.tar 710.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA

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