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| Status |
Public on Apr 19, 2024 |
| Title |
Transcriptional atlas of Daphnia magna |
| Organism |
Daphnia magna |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Transcriptomics studies are more likely to achieve predictive results when they rely on tissue- and cell-specific transcriptional data. Identification of cell types in novel model organisms by their transcriptional profiles is difficult without data on transcriptional differences among major tissues and anatomical features. Here we report the first dataset on tissue- and organ-specific transcriptomics in freshwater plankton crustacean Daphnia magna, reporting markers of eggs, hemocytes, gut, carapace, antennae and head (as well as the remaining carcass).
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| Overall design |
RNAseq of RNA tissue extracts from Daphnia eggs, hemocytes, guts, antennae, heads, carapace and carcass.
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| Contributor(s) |
Dua I, Yampolsky LY |
| Citation missing |
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| Submission date |
Apr 16, 2024 |
| Last update date |
Apr 19, 2024 |
| Contact name |
Lev Y Yampolsky |
| E-mail(s) |
yampolsk@etsu.edu
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| Phone |
4236767489
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| Organization name |
East Tennessee State University
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| Department |
Biological sciences
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| Street address |
811 Lazywood Dr
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| City |
Johnson City |
| State/province |
Tennessee |
| ZIP/Postal code |
37601-8916 |
| Country |
USA |
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| Platforms (1) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA1101019 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE264123_DaphniaAnatomyTranscriptomics.xlsx |
26.0 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
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