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Series GSE264132 Query DataSets for GSE264132
Status Public on Apr 28, 2024
Title Expression profiles of Eleocharis dulci during corm development
Organism Eleocharis dulcis
Experiment type Expression profiling by high throughput sequencing
Summary A comparative time-course transcriptome analysis of corm development revealed different patterns of gene expression between cultivated and wild Eleocharis dulcis accessions with the highest number of differentially expressed genes (DEGs) at the middle swelling stage and some of the DEGs were significantly enriched for starch metabolic process.
 
Overall design Our sampling strategy encompassed four distinct stages of corm development, i.e. Stage 1 (S1, initial swelling stage), Stage 2 (S2, middle swelling stage), Stage 3 (S3, late swelling stage), and Stage 4 (S4, maturity stage). The samples of each stage included three biological replicates. Raw reads were generated by the DNBSEQ-T7 platform.
 
Citation(s) 39127691
BioProject PRJNA1033533
Submission date Apr 16, 2024
Last update date Sep 11, 2024
Contact name yan huang
E-mail(s) huangyan230726@gmail.com
Organization name Wuhan Botanical Garden, Chinese Academy of Sciences
Street address Wuhan East Lake New Technology Development Zone Jiufeng Road No.201
City Wuhan
ZIP/Postal code 430074
Country China
 
Platforms (1)
GPL34392 DNBSEQ-T7 (Eleocharis dulcis)
Samples (24)
GSM8212639 Smple one of cultivated Eleocharis dulcis corm at its initial swelling stage
GSM8212640 Smple two of cultivated Eleocharis dulcis corm at its initial swelling stage
GSM8212641 Smple three of cultivated Eleocharis dulcis corm at its initial swelling stage

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Supplementary file Size Download File type/resource
GSE264132_gene_TPM.matrix.xls.gz 1.5 Mb (ftp)(http) XLS
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Raw data are available in SRA

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