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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 19, 2024 |
| Title |
Gene expression profile at single cell level of mouse heart from control diet (CD), high fat diet (HFD) and Western diet (WD) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Macrophages are considered as a homogeneous population in the heart. We used single cell RNA sequencing (scRNA-seq) to analyze thediversity of macrophages in control diet (CD) mouse, high fat diet (HFD) mouse and Western diet (WD) mouse heart.
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| Overall design |
CD45+F4/80+CD11b+ macrophages of the diet mice were isolated by Fluorescence-activated cell sorting (FACS) and analyzed using scRNAseq.
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| Contributor(s) |
Zhang H, Sathe A, Zhang L, Xu A |
| Citation(s) |
39056179 |
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| Submission date |
May 01, 2024 |
| Last update date |
Aug 20, 2024 |
| Contact name |
Lai Zhang |
| E-mail(s) |
zhanglai1991@126.com
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| Phone |
18746063534
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| Organization name |
The Affiliated Jiangning Hospital of Nanjing Medical University
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| Street address |
Hushan Road, Jiangning District, Nanjing
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| City |
Nanjing |
| State/province |
Jiangsu |
| ZIP/Postal code |
161252 |
| Country |
China |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA1106828 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE266363_RAW.tar |
130.5 Mb |
(http)(custom) |
TAR (of MTX, TSV) |
SRA Run Selector |
| Raw data are available in SRA |
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