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Series GSE268695 Query DataSets for GSE268695
Status Public on May 30, 2024
Title Spatial transcriptomic in synovial tissue of psoriasis (Ps) and psoriatic arthritis (PsA) humanized mice.
Organism Mus musculus
Experiment type Other
Summary Spatial transcriptomics was performed in areas enriched with CD45+ immune cells or CD8+ T cells. Data was generated with 12 mice: 4 NSG-SGM3 mice reconstituted with blood fo 4 healthy individuals, 4 NSG-SGM3 mice reconstituted with blood from 4 PsA patients and 4 NSG-SGM3 mice reconstituted with blod cells of 4 Ps patients.
 
Overall design In the study we enrolled 4 healthy individual, 4 patients with psoriasis and 4 patients with Psoriatic Arthritis . Skin lesions and artritis were evaluated with the Psoriasis Area Severity Index (PASI) Score and the extent of PsA with the Disease Assessment in Psoriatic Arthritis (DAPSA) score. We identified 1813 genes using the GeoMx platform in mouse synovail tissue collected from NSG-SGM3 mice engrafted with human PBMC and sera from healthy individuals, psoriais and Psoriatic arthritis patients.
 
Contributor(s) Isset B, Meyer EM, Bhattacharya S
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Submission date May 30, 2024
Last update date May 30, 2024
Contact name Soumyaroop Bhattacharya
E-mail(s) soumyaroop_bhattacharya@urmc.rochester.edu
Phone 5852764683
Organization name University of Rochester
Department Pediatrics
Street address 601 Elmwood Ave
City Rochester
State/province NY
ZIP/Postal code 14642
Country USA
 
Platforms (1)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (95)
GSM8296577 Hematopoetic_CD8T_67
GSM8296578 Hematopoetic_CD8T_68
GSM8296579 Hematopoetic_CD8T_69
Relations
BioProject PRJNA1118277

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE268695_Matrix_norm.xlsx 2.1 Mb (ftp)(http) XLSX
GSE268695_Processed_matrix_raw.xlsx 2.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA

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