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Series GSE269235 Query DataSets for GSE269235
Status Public on Jun 10, 2024
Title A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa
Organism Neurospora crassa
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 39229016
NIH grant(s)
Grant ID Grant title Affiliation Name
R15 GM140396 Genome topology in the filamentous fungus Neurospora crassa: organizing factors and impact on genome function UNIVERSITY OF COLORADO COLORADO SPRINGS Andrew David Klocko
Submission date Jun 06, 2024
Last update date Sep 09, 2024
Contact name Andrew David Klocko
E-mail(s) aklocko@uccs.edu
Phone 719-255-3255
Organization name University of Colorado Colorado Springs
Department Chemistry and Biochemistry
Lab Klocko
Street address 278 Centennial Hall, 1420 Austin Bluffs Pkwy
City Colorado Springs
State/province Colorado
ZIP/Postal code 80918
Country USA
 
Platforms (2)
GPL20705 Illumina HiSeq 2500 (Neurospora crassa)
GPL26551 Illumina NovaSeq 6000 (Neurospora crassa)
Samples (23)
GSM8309019 NKL2_LGIIK9het25-deletion_H3K9me3_rep1
GSM8309020 NKL2_LGIIK9het25-deletion_H3K9me3_rep2
GSM8309021 WT_N150_H3K27me2-3_rep1
This SuperSeries is composed of the following SubSeries:
GSE269228 A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [ChIP-Seq]
GSE269229 A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [Hi-C]
GSE269230 A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [RNA-Seq]
Relations
BioProject PRJNA1120774

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE269235_RAW.tar 390.2 Mb (http)(custom) TAR (of BEDGRAPH, BIGWIG, H5, TXT)
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