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Series GSE269591 Query DataSets for GSE269591
Status Public on Jun 18, 2024
Title Enhancer-driven Shh signaling promotes glia-to-mesenchyme transition during bone repair
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The healing of bone injury begins with the release of microenvironment signals and regulation ofcell identity transformation. Schwann cells (SCs) of peripheral nerve play a critical role in the earlystage of vascular remodeling and bone regeneration. However, how SCs respond to injury andinitiate the vascularized osteogenesis remains incompletely understood. Here, by employing single-cell transcriptional profiling combined with lineage-specific tracing models, we uncovered that asubset of Gli1+ mesenchymal stromal cells (MSCs) undergoing injury-induced glia-to-MSCtransition (GMT) contributed to osteogenesis and revascularization in the initial stage of bone injury.Importantly, our data demonstrated that the Sonic hedgehog (Shh) signaling was responsible for theGMT initiation, which was strongly activated by c-Jun/SIRT6/BAF170 complex-driven Shhenhancers. Collectively, these findings depict an injury-specific niche signal-mediated SCstransition towards Gli1+ MSCs and may be instructive for approaches to promote bone regenerationduring aging or other bone diseases.
 
Overall design Mice were divided into sham group and denervation group.For IAN denervation, one-side inferior alveolar nerves were severed using microsurgery.In contrast, sham surgeries involved the same dissection and retraction steps but preserved the integrity of the IAN.A postoperative period of at least two weeks was allotted to ensure complete nerve degeneration following denervation, before proceeding with any subsequent experiments.Three Sham or Denervation 12-week-old male C57BL/6J wild-type mice were combined to extract single-cell suspensions.Three days after all 3 molars tooth extraction, mandibles were meticulously isolated under a stereomicroscope.Soft tissues and jaw bone around the incisor and behind condyle were cut off to obtain the region of tooth extraction socket tissues.Tissues were digested for single-cell suspension.
 
Contributor(s) Shen X, Zhang H, Song Z, Dong Y, Ge X
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Submission date Jun 11, 2024
Last update date Jun 18, 2024
Contact name Hang Zhang
E-mail(s) hz@stu.njmu.edu.cn
Phone +86 13115020758
Organization name Nanjing Medical University
Department school of stomatology
Street address hanzhong road
City Nanjing
State/province Jiangsu
ZIP/Postal code 210029
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM8322613 mandible,sham,rep1,scRNA-seq
GSM8322614 mandible,denervated,rep1,scRNA-seq
Relations
BioProject PRJNA1122584

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE269591_RAW.tar 26.8 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA

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