|
| Status |
Public on Mar 30, 2012 |
| Title |
A Bcl6-Smrt/Ncor repression program controls atherosclerosis |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
22465074, 24074869 |
| |
| Submission date |
Feb 03, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Ruth T Yu |
| Organization name |
Salk Institute
|
| Department |
Gene Expression Lab
|
| Lab |
Ronald Evans
|
| Street address |
10010 N Torrey Pines Rd
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL6887 |
Illumina MouseWG-6 v2.0 expression beadchip |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (10)
|
| GSM665096 |
wildtype macrophages treated with control peptide, technical replicate 1 |
| GSM665097 |
wildtype macrophages treated with control peptide, technical replicate 2 |
| GSM665098 |
wildtype macrophages treated with control peptide, technical replicate 3 |
| GSM665099 |
wildtype macrophages treated with RI-BPI peptide, technical replicate 1 |
| GSM665100 |
wildtype macrophages treated with RI-BPI peptide, technical replicate 2 |
| GSM665101 |
wildtype macrophages treated with RI-BPI peptide, technical replicate 3 |
| GSM665925 |
WT macrophage_SMRT_ChIPSeq |
| GSM665926 |
WT macrophage_NCoR_ChIPSeq |
| GSM665927 |
Bcl6 KO macrophage_SMRT_ChIPSeq |
| GSM665928 |
Bcl6 KO macrophage_NCoR_ChIPSeq |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE27001 |
Inhibition of Bcl6-SMRT/NCoR interactions by an inhibitory peptide affects inflammatory pathways |
| GSE27033 |
Genome-wide location analysis of SMRT and NCoR in wild-type and Bcl6 knockout macrophages |
|
| Relations |
| BioProject |
PRJNA137601 |
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