|
| Status |
Public on Jul 01, 2012 |
| Title |
Deep sequencing analysis of human red blood cells |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Small RNAs isolated from RBCs were size fractionated by gel electrophoresis and used for the creation of 6 libraries. For the library from healthy children (library 1), RNA from 4 individuals was pooled. Libraries were multiplexed and analyzed on a 454 sequencing platform 26 yielding 569,621 sequence reads after demultiplexing into the 6 libraries
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| |
|
| Overall design |
Analysis of 6 small RNA libraries from human red blood cells
|
| |
|
| Contributor(s) |
Azzouzi I, Moest H, Wollscheid B, Schmugge M, Speer O |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Feb 11, 2011 |
| Last update date |
May 16, 2014 |
| Contact name |
imane azzouzi |
| Organization name |
Children's Hospital Zurich
|
| Department |
Haematology division
|
| Lab |
Erythrocyte Lab
|
| Street address |
Steinwiesstrasse 75
|
| City |
Zurich |
| ZIP/Postal code |
8032 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
|
| Samples (9)
|
| GSM673700 |
small RNA from red blood cells (Sample 1) |
| GSM673701 |
small RNA from red blood cells (Sample 1') |
| GSM673702 |
small RNA from red blood cells (Sample 1'') |
| GSM673703 |
small RNA from red blood cells (Sample 1''') |
| GSM673704 |
small RNA from red blood cells (Sample 2) |
| GSM673705 |
small RNA from red blood cells (Sample 3) |
| GSM673706 |
small RNA from red blood cells (Sample 4) |
| GSM673707 |
small RNA from red blood cells (Sample 5) |
| GSM673708 |
small RNA from red blood cells (Sample 6) |
|
| Relations |
| BioProject |
PRJNA137201 |
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