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Series GSE273751 Query DataSets for GSE273751
Status Public on Aug 06, 2024
Title Pseudomonas aeruginosa controls both Caenorhabdtitis elegans attraction and pathogenesis by regulating nitrogen assimilation
Organism Pseudomonas aeruginosa
Experiment type Expression profiling by high throughput sequencing
Summary Detecting chemical signals is important for identifying food sources and avoiding harmful agents. Like many animals, C. elegans use olfaction to chemotax towards their main food source, bacteria. However, little is known about the bacterial compounds governing C. elegans attraction to bacteria and the physiological importance of these compounds to bacteria. Here, we address these questions by investigating the function of a small RNA, P11, in the pathogen, Pseudomonas aeruginosa, that was previously shown to mediate learned pathogen avoidance. We discovered that this RNA also affects the attraction of untrained C. elegans to P. aeruginosa and does so by controlling production of ammonia, a volatile odorant produced during nitrogen assimilation. We describe the complex regulation of P. aeruginosa nitrogen assimilation, which is mediated by a partner-switching mechanism involving environmental nitrates, sensor proteins, and P11. In addition to mediating C. elegans attraction, we demonstrate that nitrogen assimilation mutants perturb bacterial fitness and pathogenesis during C. elegans infection by P. aeruginosa. These studies define ammonia as a major mediator of trans-kingdom signaling, implicate nitrogen assimilation as important for both bacteria and host organisms, and highlight how a bacterial metabolic pathway can either benefit or harm a host in different contexts.
 
Overall design To investigate total transcriptional changes to PA14 nitrogen assimilation in surface-attached conditions
 
Contributor(s) Marogi J, Murphy CT, Myhrvold C, Gitai Z
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Submission date Aug 01, 2024
Last update date Aug 06, 2024
Contact name Jacob Marogi
E-mail(s) jmarogi@princeton.edu
Organization name Princeton University
Street address Lewis Thomas Laboratory
City Princeton
State/province Nj
ZIP/Postal code 08540
Country USA
 
Platforms (1)
GPL33271 NextSeq 2000 (Pseudomonas aeruginosa)
Samples (9)
GSM8436426 wildtype replicate 1
GSM8436427 wildtype replicate 2
GSM8436428 wildtype replicate 3
Relations
BioProject PRJNA1142962

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE273751_allquantifiedgenesprocesseddata.xlsx 1.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA

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