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Series GSE27581 Query DataSets for GSE27581
Status Public on Mar 02, 2011
Title Expression analysis of Trichoderma reesei QM9414 and delta-phlp1, delta-gnb1 and delta-gng1 in light and darkness.
Organism Trichoderma reesei
Experiment type Expression profiling by array
Summary Investigation of whole genome gene expression level changes in response to different light conditions of the T. reesei QM9414 parental strain and the deletion strains delta-phlp1, delta-gnb1 and delta gng1, cultivated on 1 % microcrystalline cellulose.
The mutants analyzed in this study are further described in Tisch et al. 2011: Carbohydrate degradation is significantly regulated by light and the phosducin like protein PhLP1 in Trichoderma reesei (Hypocrea jecorina).
 
Overall design We used two biological replicates of four T. reesei strains (QM9414, delta-phlp1, delta-gnb1 and delta-gng1), cultivated in constant light (LL, 1800 lux) or constant darkness (DD) on microcrystalline cellulose.
 
Contributor(s) Tisch D, Schmoll M
Citation(s) 22182583, 24893562, 28809958
Submission date Mar 01, 2011
Last update date Sep 13, 2019
Contact name Doris Tisch
Organization name Technical University of Vienna
Department Chemical Engineering
Lab Biochemistry
Street address Gumpendorferstraße 1a
City Vienna
State/province Vienna
ZIP/Postal code 1060
Country Austria
 
Platforms (1)
GPL10642 NimbleGen Trichoderma reesei Whole Genome array v 1.0 [090708_Tres_MS_exp]
Samples (16)
GSM683732 QM9414_cellulose_LL_rep1
GSM683733 QM9414_cellulose_LL_rep2
GSM683734 QM9414_cellulose_DD_rep1
Relations
BioProject PRJNA138377

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27581_RAW.tar 23.6 Mb (http)(custom) TAR (of CALLS, PAIR)
Processed data included within Sample table
Processed data provided as supplementary file

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