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Series GSE27610 Query DataSets for GSE27610
Status Public on Mar 02, 2012
Title Transcriptional profiling of Aspergillus fumigatus in response to RBL-2H3 mast cells
Platform organism Aspergillus fumigatus Af293
Sample organism Aspergillus fumigatus
Experiment type Expression profiling by array
Summary In patients with chronic pulmonary disease colonization with the mold Aspergillus fumigatus is associated with declining pulmonary function and obstructive airway disease. One potential effector of this inflammatory response is the pulmonary mast cell. In vitro studies have demonstrated that A. fumigatus contact induces IgE-independent mast cell degranulation. Conversely, the Aspergillus secondary metabolite gliotoxin has been shown to suppress mast cell activation. These contradictory results emphasize the need for a better understanding of the interactions between A. fumigatus and mast cells. Thus, the objective of this work was to identify A. fumigatus genes that are differentially regulated upon exposure to mast cells. Transcriptional profiling experiments indicated that, in addition to genes encoding for iron acquisition systems, allergens and putative virulence factors, genes from the gliotoxin biosynthesis cluster were significantly down-regulated upon exposure to mast cells. Globally, the results from this study provide insight into the A. fumigatus response to mast cells and suggest that one mechanism by which the host may circumvent the effects of gliotoxin is via the suppression of fungal gliotoxin synthesis by mast cells.
 
Overall design Aspergillus fumigatus hyphae were exposed either to RBL-2H3 mast cells or culture medium for 1.5hr or 3hrs. Hybridizations were performed with biological replicates and flip-dye pairs.
 
Contributor(s) Sheppard DC, Vanier G, Chen D, Nierman WC
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Submission date Mar 01, 2011
Last update date Mar 23, 2012
Contact name Natalie Fedorova
E-mail(s) natalief@jcvi.org
Phone 301-795-7756
Fax 301-838-0208
Organization name JCVI
Department Infectious Disease
Street address 9704 Medical Center Dr
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platforms (1)
GPL10341 JCVI Aspergillus fumigatus AF293 29.9K amplicon array
Samples (6)
GSM684487 Af293 vs Af293+Mast cells 1.5hr Replicate 1
GSM684488 Af293 vs Af293+Mast cells 1.5hr Replicate 2
GSM684489 Af293 vs Af293+Mast cells 1.5hr Replicate 3
Relations
BioProject PRJNA138257

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27610_RAW.tar 9.6 Mb (http)(custom) TAR (of MEV)
Processed data included within Sample table

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