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Series GSE27899 Query DataSets for GSE27899
Status Public on Sep 27, 2012
Title Methylation profiling in Ulcerative colitis
Organism Homo sapiens
Experiment type Methylation profiling by array
Methylation profiling by genome tiling array
Summary The series was designed to identify the different methylated single CpGs involved in the pathophysiology of ulcerative colitis.
 
Overall design A cohort of n=20 monozygotic twins, discordant for ulcerative colitis was selected. Illumina and Nimblegen platforms were used.
 
Contributor(s) Häsler R, Feng Z
Citation(s)
  • Häsler R, Feng Z, Bäckdahl L, Spehlmann ME et al. A functional methylome map of ulcerative colitis. Genome Res 2012 Nov;22(11):2130-7. PMID: 22826509
Submission date Mar 10, 2011
Last update date Jan 02, 2015
Contact name Zhe Feng
Organization name Institute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany
Street address Schittenhelmstr. 12
City Kiel
ZIP/Postal code 24105
Country Germany
 
Platforms (2)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
GPL13269 Nimblegen Human high-density promoter array CpG island methylation array
Samples (40)
GSM688887 Healthy mucosa 01a (Illumina)
GSM688888 Healthy mucosa 02a (Illumina)
GSM688889 Healthy mucosa 03a (Illumina)
Relations
BioProject PRJNA138209

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27899_Illumina_raw_data.txt.gz 13.3 Mb (ftp)(http) TXT
GSE27899_RAW.tar 167.1 Mb (http)(custom) TAR (of TXT)
Processed data provided as supplementary file

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