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Series GSE28223 Query DataSets for GSE28223
Status Public on Mar 29, 2011
Title eif3k/WT polysome loading
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary To understand the contribution of the k subunit of eukaryotic transcription factor 3 (eif3k) to the translation of specific mRNAs, we compared the polysome loading states and overall transcript levels of wild type Arabidopsis and the eif3k T-DNA insertion mutant by Affymetrix arrays.
 
Overall design We analyzed the polysome loading states of wild type Arabidopsis and the eif3k mutant using the Arabidopsis Affymetrix ATH1 array. Data from 3 biological replicates were collected.
 
Contributor(s) Kim B, von Arnim A
Citation(s) 24377433
Submission date Mar 28, 2011
Last update date Aug 15, 2018
Contact name Albrecht von Arnim
E-mail(s) vonarnim@utk.edu
Phone 1-865-974-6206
Organization name the University of Tennessee
Department Biochemistry, Cellular and Molecular Biology
Lab von Arnim lab
Street address M407 Walters Life Sciences Building
City Knoxville
State/province TN
ZIP/Postal code 37996
Country USA
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM698617 non-polysome mRNA eif3k-1
GSM698618 polysome mRNA eif3k-1
GSM698619 non-polysome mRNA eif3k-2
This SubSeries is part of SuperSeries:
GSE28224 eif3k/WT polysome loading and transcript levels
Relations
BioProject PRJNA143141

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28223_RAW.tar 22.3 Mb (http)(custom) TAR (of CEL)
GSE28223_TL_states.txt.gz 1.2 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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