|
| Status |
Public on Mar 11, 2013 |
| Title |
rRNA cleavage ensures translational cessation in the mature sperm |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report how unique RNA seq profiles of ribosomal RNA (18S, 28S) present in sperm indicate specific cleavage sites. Additionally, these sequencing results reveal how overall character of RNA (GC content) can significantly affect overall distribution of mapped reads.
|
| |
|
| Overall design |
Examination of rRNA population and distribution in spermatozoa
|
| |
|
| Contributor(s) |
Johnson GD, Krawetz SA, Sendler ED |
| Citation(s) |
21831882, 23856356 |
| |
| Submission date |
May 09, 2011 |
| Last update date |
Feb 05, 2020 |
| Contact name |
Stephen Krawetz |
| E-mail(s) |
steve@compbio.med.wayne.edu
|
| Phone |
313-577-6770
|
| Organization name |
Wayne State University School of Medicine
|
| Department |
Center for Molecular Medicine and Genetics
|
| Lab |
C.S. Mott Center for Human Growth and Development
|
| Street address |
275 E. Hancock
|
| City |
Detroit |
| State/province |
MI |
| ZIP/Postal code |
48201 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (6)
|
|
| Relations |
| SRA |
SRP006769 |
| BioProject |
PRJNA140019 |
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