|
| Status |
Public on Dec 29, 2011 |
| Title |
Comparison of male and female floral organs |
| Platform organism |
Populus sp. |
| Sample organism |
Populus deltoides |
| Experiment type |
Expression profiling by array
|
| Summary |
We conducted micro-array analysis to quantify the global transcriptome variations in floral organs of a male and female tree allowing for identification of sex-linked transcripts. We used RNA samples from male floral buds in August and female floral buds in Spetemeber. Bud scale were removed. While the sampling time differed, the developmental stage of the floral organs was similar between the male and female.
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| Overall design |
Five independent samples of floral bud tissues with bud scales removes were collected from the upper crown of a sexually mature male tree and female tree. RNA was extracted from tissues and hybridized on Affymetrix Genechip Poplar Genome Array.
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| Contributor(s) |
Hsu C, Adams JP, Page G, Yuceer C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 17, 2011 |
| Last update date |
Jan 02, 2015 |
| Contact name |
Joshua Adams |
| E-mail(s) |
AdamsJ@uamont.edu
|
| Phone |
8704601348
|
| Organization name |
University of Arkansas-Monticello
|
| Department |
Forest Resources
|
| Street address |
PO Box 3468
|
| City |
Monticello |
| State/province |
AR |
| ZIP/Postal code |
71656 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL4359 |
[Poplar] Affymetrix Poplar Genome Array |
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| Samples (10)
|
| GSM724729 |
male floral bud sample from August 2005, rep1 |
| GSM724730 |
male floral bud sample from August 2005, rep2 |
| GSM724731 |
male floral bud sample from August 2005, rep3 |
| GSM724732 |
male floral bud sample from August 2005, rep4 |
| GSM724733 |
male floral bud sample from August 2005, rep5 |
| GSM724734 |
female floral bud sample from September 2005, rep1 |
| GSM724735 |
female floral bud sample from September 2005, rep2 |
| GSM724736 |
female floral bud sample from September 2005, rep3 |
| GSM724737 |
female floral bud sample from September 2005, rep4 |
| GSM724738 |
female floral bud sample from September 2005, rep5 |
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| Relations |
| BioProject |
PRJNA140139 |
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