NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE30456 Query DataSets for GSE30456
Status Public on Oct 03, 2011
Title Maintenance of hESCs in mesenchymal stem cell-conditioned media augments hematopoietic specification
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary The realization of human embryonic stem cells (hESC) as a model for human developmental hematopoiesis and potential cell replacement strategies relies on an improved understanding of the extrinsic and intrinsic factors regulating hematopoietic-specific hESC differentiation. Mesenchymal stem cells (hMSCs) are multipotent cells of mesodermal origin that form part of hematopoietic stem cell niches and have an important role in the regulation of hematopoiesis through production of secreted factors and/or cell-to-cell interactions. We have previously shown that hESCs may be successfully maintained feeder-free using hMSC-conditioned media (MSC-CM). Here, we hypothesized that hESCs maintained in MSC-CM may be more prone to differentiation towards hematopoietic lineage than hESCs grown in standard human foreskin fibroblast (HFF)-conditioned media (HFF-CM). We report that specification into hemogenic progenitors and subsequent hematopoietic differentiation and clonogenic progenitor capacity is robustly enhanced in hESC lines maintained in MSC-CM. Interestingly, co-culture of hESCs on hMSCs fully abrogates hematopoietic specification of hESCs suggesting that the improved hematopoietic differentiation is mediated by MSC-secreted factors rather than by MSC-hESC physical interactions. To investigate the molecular mechanism involved in this process, we analyzed global (LINE-1) methylation and genome-wide promoter DNA methylation. Human ESCs grown in MSC-CM showed a decrease of 20% in global DNA methylation and a promoter DNA methylation signature consisting in 45 genes commonly hypomethylated and 102 genes frequently hypermethylated. Our data indicate that maintenance of hESCs in MSC-CM robustly augments hematopoietic specification and that the process seems mediated by MSC-secreted factors conferring a DNA methylation signature to undifferentiated hESCs which may influence further predisposition towards hematopoietic specification.
 
Overall design Total DNA isolated by standard procedures from human embryonic stem cells (hESC) cultured in different conditioned media
 
Contributor(s) Ramos-Mejía V, Fernandez AF, Ayllón V, Real PJ, Bueno C, Sánchez L, Ligero G, Fraga MF, Menendez P
Citation(s) 21936705
Submission date Jul 06, 2011
Last update date Jan 02, 2015
Contact name Agustin F Fernandez
E-mail(s) affernandez@hca.es, agusff@gmail.com
Phone 985652411
Organization name Oviedo University-HUCA
Department IUOPA
Lab Epigenetics
Street address Avenida de Roma s/n
City Oviedo
State/province Asturias
ZIP/Postal code 33011
Country Spain
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (6)
GSM755488 H9 hESC cultured in human foreskin fibroblast-conditioned media
GSM755489 H13C hESC cultured in human foreskin fibroblast-conditioned media
GSM755490 SHEF2 hESC cultured in human foreskin fibroblast-conditioned media
Relations
BioProject PRJNA143543

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30456_RAW.tar 5.8 Mb (http)(custom) TAR
GSE30456_matrix_signal_intensities.txt.gz 850.7 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap