|
| Status |
Public on Jan 18, 2012 |
| Title |
Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
Bisulphite sequencing enables DNA methylation analysis of every cytosine residue. We have optimized conditions for combining chromatin immunoprecipation (ChIP) with high throughput bisulphite sequencing to study the relationship between histone modifications and DNA methylation.
|
| |
|
| Overall design |
Paired-end bisulphite sequencing of H3K27me3-ChIP DNA for LNCaP and PrEC cell lines
|
| |
|
| Contributor(s) |
Robinson MD |
| Citation(s) |
22466171 |
| |
| Submission date |
Jul 11, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Mark Robinson |
| E-mail(s) |
mark.robinson@imls.uzh.ch
|
| Organization name |
University of Zuerich
|
| Department |
Institute of Molecular Life Sciences
|
| Street address |
Winterthurerstrasse 190
|
| City |
Zuerich |
| ZIP/Postal code |
8057 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (2) |
|
| This SubSeries is part of SuperSeries: |
| GSE34403 |
Bisulphite-sequencing of chromatin immunoprecipitated DNA directly informs methylation status of histone-modified DNA |
|
| Relations |
| SRA |
SRP007491 |
| BioProject |
PRJNA155495 |
