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Series GSE31538 Query DataSets for GSE31538
Status Public on Aug 16, 2012
Title The PerA regulon in Enterococcus faecalis
Platform organisms Bacillus anthracis; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Escherichia coli O157:H7 str. EDL933; Escherichia coli CFT073; Enterococcus faecalis V583; Bacteroides thetaiotaomicron VPI-5482; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655
Sample organism Enterococcus faecalis
Experiment type Expression profiling by array
Summary Transcriptional profiling of E. faecalis E99 WT and an isogenic ΔperA strain grown in THB + 1% glucose.
Pathogenic E. faecalis are enriched for a pathogenicity island (PAI). This 150-kb island harbors a number of well characterized virulence genes plus a number of determinants of unknown function including one encoding a transcriptional regulator, designated PerA. In this work, we show that PerA coordinately regulates both metabolic and virulence genes, and influences the platelet binding ability of E. faecalis. Finally, we show that PerA responds to bicarbonate, an intestinal ion frequently used by pathogens to determine the site of infection. Together, these results indicate that PerA is a global transcriptional regulator that coordinately regulates genes responsible for enterococcal pathogenicity. These findings highlight a novel feature of PAI-mediated virulence regulation, namely the coordinate regulation of metabolic and virulence factors in the core genome by a horizontally acquired PAI-encoded transcriptional regulator.
 
Overall design RNA was obtained from E. faecalis E99 ΔperA from mid-log (OD600 0.05), late log (OD600 0.5) and stationary phase (OD600 1.0) and compared to E. faecalis E99 WT RNA extracted from the same growth phases. Cultures were grown in THB + 1% glucose.
 
Contributor(s) Maddox S, Conway T, Grissom J
Citation(s) 22496800
Submission date Aug 19, 2011
Last update date Nov 15, 2012
Contact name Scott M Maddox
E-mail(s) scottmaddox@ou.edu
Organization name University of Oklahoma
Department Botany and Microbiology
Lab Tyrrell Conway
Street address 101 David L. Boren Blvd.
City Norman
State/province OK
ZIP/Postal code 73115
Country USA
 
Platforms (1)
GPL6702 Affymetrix Custom Array - enterocha520147F
Samples (12)
GSM782773 E99 WT 0.05 rep1
GSM782774 E99 WT 0.05 rep2
GSM782775 E99 ΔperA 0.05 rep1
Relations
BioProject PRJNA145491

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31538_RAW.tar 31.4 Mb (http)(custom) TAR (of CEL)
GSE31538_avg_expr_ratios.txt.gz 31.9 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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