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Series GSE31569 Query DataSets for GSE31569
Status Public on Sep 01, 2012
Title Insights into the transcriptomics of polyphagy: Bemisia tabaci adaptability to phenylpropanoids involves coordinated expression of defense and metabolic genes
Organism Bemisia tabaci
Experiment type Expression profiling by array
Summary Background: The whitefly Bemisia tabaci is a major generalist agricultural pest of field and horticultural crops world-wide. Despite its importance, the molecular bases of defense mechanisms in B. tabaci against major plant secondary defense compounds, such as the phenylpropanoids, remain unknown.
Results: Our experimental system utilized transgenic Nicotiana tabacum plants constitutively expressing the PAP1 ⁄ AtMYB75 transcription factor which activates specifically the phenylpropanoid / flavonoids biosynthetic pathway. Our study used suppression subtractive hybridization (SSH) and cDNA microarray approaches to compare gene expression between B. tabaci adults subjected to wild-type or transgenic plants for six hours. A total of 2880 clones from the SSH libraries were sequenced. Both the SSH and cDNA microarray analyses indicated a complex interaction between B. tabaci and secondary defense metabolites produced by the phenylproapnoids / flavonoids pathway, involving enhanced expression of detoxification, immunity, oxidative stress and general stress related genes as well as general metabolism and ribosomal genes. Quantitative PCR revealed significant changes in the expression of several of these genes in response to feeding on artificial diet containing the flavonol quercetin. The elevated transcriptional activity was not accompanied by reduced reproductive performance, indicating high adaptability of B. tabaci to this large group of plant secondary defense metabolites.
Conclusion: Results of this study allows first insight into the molecular mechanisms underlining polyphagy in B. tabaci. Our analyses revealed many candidate genes related to the insect's various defense systems capable of neutralizing a broad range of plant toxins. Future technological developments allowing silencing or over-expression of selected target genes in B. tabaci, will enable determining a specific linkage between gene expression and host related performance in this species.
 
Overall design 3 hybridizations were performed for RNA extracted from Bemisia tabaci adults that fed on PAP Purple transgenic tobacco plants for 6hr, labeled with Cy5 and directly hybridized against 3 samples from B. tabaci adults that fed on wild type plants as a control and labeled with Cy3. Another 3 swap dye hybridizations were performed in which adults that fed on wild type plants for 6hr were coupled with the Cy5 and adults that fed on PAP Purple transgenic plants were coupled with Cy3.
 
Contributor(s) Alon M, Elbaz M, Ben-Zvi MM, Feldmesser E, Vainstein A, Morin S
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Submission date Aug 22, 2011
Last update date Sep 02, 2012
Contact name Michal Alon
E-mail(s) alon@agri.huji.ac.il
Phone 972-8-9489365
Fax 972-8-9466768
Organization name Hebrew University of Jerusalem
Department Department of Entomology
Lab Dr. Shai Morin
Street address Herzel St.
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL9003 Whitefly (Bemisia tabaci) unique EST array Bemisia tabaci (Gennadius)
Samples (6)
GSM783819 Bemisia tabaci adults fed on PAP Purple plants for 6hr vs wild type- Replicate1
GSM783820 Bemisia tabaci adults fed on PAP Purple plants for 6hr vs wild type- Replicate1- dye swap
GSM783821 Bemisia tabaci adults fed on PAP Purple plants for 6hr vs wild type - Replicate2
Relations
BioProject PRJNA145703

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31569_RAW.tar 4.8 Mb (http)(custom) TAR (of GPR)
GSE31569_normalized_merged_data.txt.gz 117.9 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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