|
| Status |
Public on Dec 20, 2011 |
| Title |
High resolution methylome map of rat reveals role of intragenic DNA methylation in identifying coding region and alternative splice site. |
| Organism |
Rattus norvegicus |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
We report the application of next generation sequencing technology for high-throughput profiling of cytosine methylation in adult rat liver tissue.
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| |
|
| Overall design |
To investigate the role of intragenic methylation, we generated the first high resolution methylation map of rat liver tissue and compared it with the proteome of the same rat tissue.
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| Contributor(s) |
Shantanu S, Satish S, Vinay Singh T, Vaibhav J |
| Citation(s) |
22355382 |
| |
| Submission date |
Aug 22, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Shantanu Sen Gupta |
| E-mail(s) |
shantanus@igib.res.in
|
| Phone |
01127666156
|
| Organization name |
Institute of Genomics & Integrative Biology
|
| Department |
Genomics and Molecular Medicine Unit
|
| Lab |
308
|
| Street address |
Mall Road, Delhi University Campus
|
| City |
Delhi |
| State/province |
New Delhi |
| ZIP/Postal code |
110007 |
| Country |
India |
| |
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| Platforms (1) |
| GPL10669 |
Illumina Genome Analyzer IIx (Rattus norvegicus) |
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| Samples (2) |
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| Relations |
| SRA |
SRP007951 |
| BioProject |
PRJNA145707 |
