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Series GSE32125 Query DataSets for GSE32125
Status Public on Sep 15, 2011
Title Mammary Gland Morphological and Gene Expression Changes Underlying Pregnancy Protection of Breast Cancer Tumorigenesis
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Pregnancy has been shown to decrease the risk of mammary carcinogenesis in human rretrospective epidemiological studies. In rodents, pregnancy prior to carcinogen administration or after carcinogen challenge has also been shown to reduce the incidence of palpable carcinomas. In this study our objective to determine the underlying genomic signature of the pregnancy and reproductive hormones on the mammary gland that contribute to the protection against mammary gland carcinogenesis.
We used the rat microarray technology to observe total transcriptome changes after the pregnancy and exogenous reproductive hormone stimulation of the mammary gland.
 
Overall design Fifteen 3 month old post-pubertal virgin Lewis rats were randomly assigned to three groups (5 rats per group): control (C), pregnancy (P) and hormone treatment (H). The P group animals had a full-term pregnancy (21-23 days) and rats in the group H were implanted subcutaneously on the dorsal midline with two silastic capsules [(0.078 inch inner diameter, 0.125 inch outer diameter) x 2 cm long; Dow Corning, Midland, MI) filled separately with 100 μg ethynyl estradiol (Sigma, St. Louis, MO) packed in a cellulose matrix (Sigma) and 30 mg of megesterol acetate (Sigma) for 21 days. The control animals had neither the hormone treatment nor being pregnant. The animals in C and P groups were also implanted with sham capsules filled with cellulose matrix only. The capsules were surgically implanted at the beginning of the experiment and removed from all animals after 21 days except that the capsules were removed from the P group following parturition (21-23 days). The delivered pups in the P group were euthanized within 4-6 hours of delivery to avoid suckling. After the removal of capsules all groups were rested a total of ~49 days before euthanasia. All animals were euthanized during metestrus stage, determined by vaginal cytology and total RNA was extracted from the mammary gland tissues using Trizol reagent.
 
Contributor(s) Misra Y, Bentley PA, Bond JP, Tighe S, Hunter T, Zhao F
Citation(s) 22085904
Submission date Sep 14, 2011
Last update date Jul 31, 2017
Contact name Yogi Misra
E-mail(s) ymisra@uvm.edu
Phone 8023998334
Organization name UVM
Department Animal Science
Lab Zhao
Street address 570 Main street
City Burlington
State/province Vermont
ZIP/Postal code 05405
Country USA
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (15)
GSM796392 C1_rat_mammary gland
GSM796393 C2_rat_mammary gland
GSM796394 C4_rat_mammary gland
Relations
BioProject PRJNA147429

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32125_RAW.tar 42.0 Mb (http)(custom) TAR (of CEL)
GSE32125_analysis_results.txt.gz 14.7 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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