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Series GSE32199 Query DataSets for GSE32199
Status Public on Nov 10, 2011
Title BMP and Activin treatment of mouse extraembryonic endoderm (XEN) cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary XEN cells are derived from the primitive endoderm of mouse blastocysts. In culture and in chimeras they exhibit properties of parietal endoderm. However, BMP signaling promotes XEN cells to form an epithelium and differentiate into visceral endoderm (VE). Of the several different subtypes of VE described, BMP induces a subtype that is most similar to the VE adjacent to the trophoblast-derived extraembryonic ectoderm.
The experiment was performed to gain insight into genes regulated by BMP and activin in XEN cells, and also to more precisely define the VE subtypes formed in culture.
 
Overall design IM8A1 XEN cells were treated for 6 days with BMP2 (20 ng/ml, R&D Systems), activin A (30 ng/ml, Peprotech), both, or neither in GMEM + 10% fetal bovine serum.
 
Contributor(s) Sequin C, Rossant J, Kunath T
Citation(s) 22027433
Submission date Sep 18, 2011
Last update date Feb 11, 2019
Contact name Tilo Kunath
E-mail(s) tilo.kunath@ed.ac.uk
Phone +44 (0) 131 651 9500
Organization name University of Edinburgh
Department Centre for Regenerative Medicine
Street address 5 LIttle France Drive
City Edinburgh
ZIP/Postal code EH16 4UU
Country United Kingdom
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (6)
GSM797837 Untreated XEN cells rep1
GSM797838 Activin-treated XEN cells
GSM797839 BMP2-treated XEN cells rep1
Relations
BioProject PRJNA147383

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32199_RAW.tar 23.8 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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