|
| Status |
Public on Nov 30, 2011 |
| Title |
Transcriptional landscape of Candida parapsilosis |
| Organism |
Candida parapsilosis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We used next generation sequencing (RNA-seq) to determine the transcriptional profile of C. parapsilosis growing in several conditions including different media, temperatures and oxygen concentrations.
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| |
|
| Overall design |
We have 37 Samples representing BMW and YPD media, 1% and 21% oxygen, 30 and 37 degree celsius temperature, and CLIB214 and CDupc5 strains.
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| |
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| Contributor(s) |
Guida A, Lindstaedt C, Maguire SL, Ding C, Higgins DG, Harris D, Berriman M, Butler G |
| Citation(s) |
22192698 |
| |
| Submission date |
Oct 10, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Geraldine Butler |
| E-mail(s) |
geraldine.butler@ucd.ie
|
| Organization name |
University Colege Dublin Conway Institute
|
| Department |
School of Biomolecular and Biomedical Science
|
| Lab |
Butler lab
|
| Street address |
Belfield
|
| City |
Dublin |
| ZIP/Postal code |
D4 |
| Country |
Ireland |
| |
|
| Platforms (1) |
| GPL14718 |
Illumina Genome Analyzer II (Candida parapsilosis) |
|
| Samples (26)
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| This SubSeries is part of SuperSeries: |
| GSE32716 |
Transcriptional landscape of the pathogenic yeast Candida parapsilosis |
|
| Relations |
| SRA |
SRP008827 |
| BioProject |
PRJNA154483 |
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