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Series GSE33237 Query DataSets for GSE33237
Status Public on Oct 25, 2015
Title Genome-wide profiling of small RNAs in sorghum under abiotic stresses
Organism Sorghum bicolor
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To identify novel miRNA and NAT-siRNAs that are associated with abiotic stresses in sorghum, we generated small RNA sequences from sorghum seedlings that grew under control and under dought, salt, and cold stress treatments.
 
Overall design sequencing of small RNAs in sorghum under control, drought, salt, and cold stress conditions.
 
Contributor(s) Wu Z, Gao L, Barrera-Figueroa BE, Zhu J, Liu R
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Submission date Oct 26, 2011
Last update date May 15, 2019
Contact name Renyi Liu
E-mail(s) rliu.bicomp@gmail.com
Phone 02157078228
Organization name Shanghai Center for Plant Stress Biology
Department Bioinformatics
Street address 3888 Chenhua Road
City Shanghai
State/province Shanghai
ZIP/Postal code 201602
Country China
 
Platforms (1)
GPL14790 Illumina Genome Analyzer (Sorghum bicolor)
Samples (4)
GSM822663 sorghum_control
GSM822664 sorghum_drought
GSM822665 sorghum_cold
Relations
SRA SRP009100
BioProject PRJNA149413

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary data files not provided
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Raw data are available in SRA
Processed data included within Sample table

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