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Series GSE33866 Query DataSets for GSE33866
Status Public on Jan 26, 2012
Title Deep-sequencing of total RNA from manually dissected wild-type Arabidopsis embryos at the globular stage
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary This dataset provide deep-profiling of the embryonic transcriptome of total RNA at the globular stage in Arabidopsis. Embryos were derived from a cross between Col0 (mother) and Ler (father). Embryos were manually dissected ensuring no contamination with maternal seed coat or endosperm. For details on the method, see PMID: 21620136.
Overall design 1 sample: cross between Col0 and Ler
Contributor(s) Baroux C, Raissig M, Grossniklaus U, Wittig M, Rosenstiel P
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 22, 2011
Last update date May 15, 2019
Contact name Marc William Schmid
Organization name MWSchmid GmbH
Street address Hauptstrasse 34
City Glarus
ZIP/Postal code 8750
Country Switzerland
Platforms (1)
GPL10088 AB SOLiD System 3.0 (Arabidopsis thaliana)
Samples (1)
GSM838189 total amplified RNA, globular Col/Ler embryos, sample # MC_ColLer_2
SRA SRP009413
BioProject PRJNA148157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33866_RAW.tar 440.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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