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Series GSE34466 Query DataSets for GSE34466
Status Public on Dec 05, 2012
Title Airway Epithelial miRNA Expression in Asthma
Platform organisms Caenorhabditis elegans; Drosophila melanogaster; Danio rerio; Gallus gallus; Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We performed genome-wide profiling of miRNA expression in the airway epithelial compartment in asthma to identify miRNA pathways associated with epithelial abnormalities using miRNA microarrays and real-time PCR. We also sought to identify the effect of inhaled corticosteroids (ICS) on airway epithelial miRNA expression
 
Overall design Samples were obtained from airway epithelial cells by bronchoscopic brushing from three groups of subjects: Healthy Controls ( N=12), Steroid Naïve Asthma (N=16), Steroid-requiring Asthma (N=19).
 
Citation(s) 22955319
Submission date Dec 15, 2011
Last update date Dec 05, 2012
Contact name Andrea J Barczak
Organization name UCSF Sandler Center Functional Genomics Core Facility
Street address 1550 4th St Rock Hall 545
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL15016 Agilent-025771 UCSF Multi-species custom array miRNA-v3.5-8x15k
Samples (63)
GSM849690 Healthy control (X02MASTAH.B1)
GSM849691 Post-steroid asthma (X05MASTAH.B1)
GSM849692 Healthy control (X06MASTAH.B1)
Relations
BioProject PRJNA151183

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34466_RAW.tar 50.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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