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| Status |
Public on Dec 28, 2012 |
| Title |
High-throughput sequencing of small RNAs from seedling of Larix leptolepis |
| Organism |
Larix kaempferi |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
MicroRNAs (miRNAs) are emerging as essential, albeit poorly characterized, regulators of biological processes. The miRNA in gymnosperms is under-identified, which limits the progress of miRNA in gymnoperms. Using the high-throughput sequencing, a total of 87 conserved miRNAs were identified from Larix leptolepis. Eighteen novel miRNAs were discovered in our library, most of which were Larix-specific miRNAs.
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| |
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| Overall design |
Identification of small RNA in Larix seedling
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| |
|
| Contributor(s) |
Qi L, Wu T, Zhang J |
| Citation(s) |
22983700 |
| |
| Submission date |
Jan 03, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Liwang Qi |
| E-mail(s) |
zjh6719036@163.com
|
| Phone |
86-10-62888881
|
| Organization name |
The Chinese Academy of Forestry
|
| Department |
The Research Institute of Forestry
|
| Lab |
Cell biology of Trees
|
| Street address |
Xiang shan Road
|
| City |
Beijing |
| ZIP/Postal code |
100091 |
| Country |
China |
| |
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| Platforms (1) |
| GPL13980 |
Illumina Genome Analyzer IIx (Larix kaempferi) |
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| Samples (1) |
| GSM855665 |
Endogenous small RNAs from Larix leptolepis seedling |
|
| Relations |
| SRA |
SRP010093 |
| BioProject |
PRJNA151137 |
