GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE36540 Query DataSets for GSE36540
Status Public on Jul 23, 2012
Title Sequencing random oligonucleotides using standard GA II protocol
Organism synthetic construct
Experiment type Other
Summary Study on sequencing biases introduced by library preparation step, namely by ligases. Comparison between standard Illumina protocol and improved High Definition (HD) protocol.
Overall design Four replicates for N21 (21 random nucleotides), one replicate for N9 (9 random nucleotides), using either standard Illumina protocol or HD protocol
Contributor(s) Pais H, Sorefan K, Moulton V, Dalmay T
Citation(s) 22647250
Submission date Mar 15, 2012
Last update date May 15, 2019
Contact name Helio Pais
Organization name University of Oxford
Department Weatherall Institute of Molecular Medicine
Street address Jonh Radcliffe Hospital
City Oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
Platforms (1)
GPL9423 Illumina Genome Analyzer II (synthetic construct)
Samples (10)
GSM896520 N21-Illumina-r1
GSM896521 N21-Illumina-r2
GSM896522 N21-Illumina-r3
SRA SRP011538
BioProject PRJNA153413

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36540_RAW.tar 285.6 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap