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Series GSE38030 Query DataSets for GSE38030
Status Public on Mar 31, 2013
Title Arabidopsis cold regulated transcriptome, translatome and CSP1 RNA regulon
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Transcriptome, translatome, and CSP1 RNA regulon analysis of 25-d-o Arabidopsis rosettes exposed to 12h low temperature (4C) treatment.
 
Overall design 38 samples, 3 genotypes (35S:HF-RPL18, 35S:AtCSP1-FH#11, and atcsp1-1), 2 conditions (non-stress and cold), 3 RNA pools (total, polysomal, and CSP1 associated mRNAs), 2-3 biological replicates
 
Contributor(s) Juntawong P, Bailey-Serres J
Citation(s) 23551487
Submission date May 17, 2012
Last update date Aug 15, 2018
Contact name Piyada Juntawong
E-mail(s) piyada.juntawong@ucr.edu
Organization name University of California Riverside
Department Botany and Plant Sciences
Lab Julia Bailey-Serres
Street address 900 University ave
City Riverside
State/province CA
ZIP/Postal code 92521
Country USA
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (38)
GSM932734 Total RNA from 35S:HF-RPL18, non-stress rep 1
GSM932735 Total RNA from 35S:HF-RPL18, cold rep 1
GSM932736 Polysomal RNA from 35S:HF-RPL18, non-stress rep 1
Relations
Affiliated with GSE69995
BioProject PRJNA167103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38030_RAW.tar 65.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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