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Series GSE3811 Query DataSets for GSE3811
Status Public on May 15, 2006
Title Expression during deetioaltion under Rc in wt and phy mutant seedlings
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Etiolated seedling response to one hour of continuous red light. Four-day-old dark-grown wild-type RLD and phyA101, phyB1 and phyAphyB mutant seedlings were transferred to Rc (680 nm, 8 mol m-2 s-1) for 1 h or retained in darkness as controls. Three different biological replicates of each treatment were grown separately and extracted, processed, and analyzed independently.RNA was extracted and subjected to expression analysis by using the Affymetrix ATH1 microarray containing approximately 22,000 Arabidopsis genes .
 
Overall design 3 dark and 3 1hr Rc samples ( biological replicates) were analyzed for each genotype
 
Contributor(s) Tepperman JM
Citation(s) 17076805
Submission date Dec 12, 2005
Last update date Jun 12, 2017
Contact name james m tepperman
E-mail(s) jmtepp@berkeley.edu
Phone 510-559-5935
Organization name Plant Gene Expression Center/UC Berkeley
Department Plant and Microbial Biology
Lab QUAIL
Street address 800 Buchanan St.
City Albany
State/province CA
ZIP/Postal code 94710
Country USA
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (24)
GSM87413 4 day seedling dark rep1_wildtype
GSM87414 4 day seedling dark rep2_wildtype
GSM87415 4 day seedling dark rep3_wildtype
Relations
BioProject PRJNA94017

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Supplementary data files not provided
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