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Status |
Public on Jun 01, 2015 |
Title |
Hi-seq 2000 sequencing facilitates quantitative analysis of transcriptomes in LNCaP cells with or without SiGATA2 treatment. |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
We obtained 1,367 GATA2 up-regulated and 759 GATA2 down-regulated genes (p< 0.001).
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Overall design |
mRNA profiles of LNCaP cell treated with or without SiGATA2 were generated by deep sequencing in duplicate using Hi-Seq 2000.
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Contributor(s) |
Wu D, Ye Z, Wang Q |
Citation missing |
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Submission date |
Jun 01, 2012 |
Last update date |
May 15, 2019 |
Contact name |
Zhenqing Ye |
E-mail(s) |
yez@uthscsa.edu
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Organization name |
The University of Texas Health Science Center at San Antonio
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Department |
Department of Molecular Medicine
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Street address |
7703 Floyd Curl Drive
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City |
San Antonio |
State/province |
Texas |
ZIP/Postal code |
78229 |
Country |
USA |
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Platforms (1) |
GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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Samples (4)
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This SubSeries is part of SuperSeries: |
GSE38452 |
A Class of H3K4me1/H3K9me2 marked active GATA2 enhancers directs a GATA2-dependent transcription program underlying prostate cancer progression. |
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Relations |
BioProject |
PRJNA167797 |
SRA |
SRP013473 |