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Status |
Public on Nov 30, 2012 |
Title |
Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
Capped analysis of gene expression (CAGE) sequencing was done on a normal and a cancer cell line to examine how promoter usage changes between these two states.
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|
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Overall design |
One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.
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Contributor(s) |
Statham A |
Citation(s) |
- Bert SA, Robinson MD, Strbenac D, Statham AL et al. Regional activation of the cancer genome by long-range epigenetic remodeling. Cancer Cell 2013 Jan 14;23(1):9-22. PMID: 23245995
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Submission date |
Jun 13, 2012 |
Last update date |
May 15, 2019 |
Contact name |
Aaron Statham |
E-mail(s) |
a.statham@garvan.org.au
|
Organization name |
Garvan Institute of Medical Research
|
Department |
Cancer Department
|
Lab |
Epigenetics Research Laboratory
|
Street address |
384 Victoria St
|
City |
Darlinghurst |
State/province |
NSW |
ZIP/Postal code |
2010 |
Country |
Australia |
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|
Platforms (1) |
GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
Samples (2) |
GSM947446 |
Transcription Start Site Sequencing of PrEC Cells |
GSM947447 |
Transcription Start Site Sequencing of LNCaP Cells |
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This SubSeries is part of SuperSeries: |
GSE38685 |
Normal and Cancerous Prostate Cells |
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Relations |
BioProject |
PRJNA168461 |
SRA |
SRP013725 |