|
| Status |
Public on Jun 29, 2012 |
| Title |
Fcp1 dephosphorylation of the RNA polymerase II C-terminal domain required for efficient transcription of heat shock genes |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA polymerase II is decreased on heat shock-induced genes when the CTD phosphatase Fcp1 is knocked down in Drosophila S2 cells. We examined transcriptionally-engaged Pol II genome-wide with GRO-seq to determine if other genes are similarly affected.
|
| |
|
| Overall design |
Two biological replicates of nascent RNA sequencing
|
| |
|
| Contributor(s) |
Fuda NJ, Lis JT |
| Citation(s) |
22733996 |
| Submission date |
Jun 15, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Nicholas Fuda |
| E-mail(s) |
njf6@cornell.edu
|
| Organization name |
Cornell University
|
| Department |
Molecular Biology and Genetics
|
| Street address |
417 Biotechnology Building, Cornell University
|
| City |
Ithaca |
| State/province |
New York |
| ZIP/Postal code |
14853 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9058 |
Illumina Genome Analyzer (Drosophila melanogaster) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA168561 |
| SRA |
SRP013761 |
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