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Series GSE39440 Query DataSets for GSE39440
Status Public on Aug 14, 2012
Title microRNA Profiling in Metastatic Renal Cell Carcinoma
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We performed a microRNA (miRNA) microarray on 10 metastatic RCC tumors and compared differential miRNA expresison to 19 primary clear cell renal cell carcinomas (ccRCC). We found there were 65 significantly dysregulated miRNAs; 9 miRNAs were significantly upregulated and 56 miRNAs were significantly downregulated in metastatic RCC when compared to primary clear cell renal cell carcinoma.
 
Overall design miRNA microarray was performed on 10 metastatic RCC tumors
 
Contributor(s) White NM, Grigull J, Yousef GM
Citation(s) 22033272
Submission date Jul 17, 2012
Last update date Nov 13, 2012
Contact name George M Yousef
E-mail(s) yousefg@smh.ca
Organization name St.Michael's Hospital
Department Pathology
Street address 30 Bond Street
City Toronto
State/province ON
ZIP/Postal code M5B 1W8
Country Canada
 
Platforms (1)
GPL10415 LC_MRA-1001_miRHuman_13.0_090309 (miRNA ID version)
Samples (5)
GSM968784 (OK31_OK32)
GSM968785 (OK33_OK34)
GSM968786 (OK35_OK36)
Relations
BioProject PRJNA172767

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39440_RAW.tar 550.0 Kb (http)(custom) TAR (of TXT)
GSE39440_metastatic_RCC_to_primary_RCC.txt.gz 68.3 Kb (ftp)(http) TXT
GSE39440_mets_average_fold_change.txt.gz 9.6 Kb (ftp)(http) TXT
GSE39440_mets_fold_change.txt.gz 115.5 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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